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Kavun, F.B., Ülgen, K.Ö., “Metabolic Control Analysis and Metabolic Pathway Analysis of Sphingolipid Metabolism for Anticancer Drug Target Identification”, Journal of Biotechnology, 118, S51-S51, 2005. Dil Türkçe
Örücü, E., Karakaya, M., Avcı, A.K., Önsan, Z.İ., “Investigation of Ethanol Conversion for Hydrogen Fuel Cells using Computer Simulations”, Journal of Chemical Technology and Biotechnology, 80, 10, 1103-1110, 2005. Dil Türkçe
Pir, P., Kırdar, B., Önsan, Z., Ülgen, K.O., Hayes, A., Oliver, S.G., “Integration of Metabolome and Transcriptome Profiles from Perturbed Chemostats of S Cerevisiae”, Journal of Biotechnology, 118, S6-S6, 2005. Dil Türkçe
Arga, K.Y., Kırdar, B., Ülgen, K., Nielsen, J., “Integrated Approach to Reconstruct Signal Transduction Networks”, Journal of Biotechnology, 118, , S10-S10, 2005. Dil Türkçe
Haliloğlu, T., Keskin, O., Ma, B.Y., Nussinov, R., “How Similar are Protein Folding and Protein Binding Nuclei? Examination of Vibrational Motions of Energy Hot Spots and Conserved Residues”, Biophysical Journal, 88, 3, 1552-1559, 2005. Dil Türkçe
Alakent, B., Çamurdan, M.C., Doruker, P., “Hierarchical Structure of the Energy Landscape of Proteins Revisited by Time Series Analysis II Investigation of Explicit Solvent Effects”, Journal of Chemical Physics, 123, 14, 2005. Dil Türkçe
Alakent, B., Çamurdan, M.C., Doruker, P., “Hierarchical Structure of the Energy Landscape of Proteins Revisited by Time Series Analysis I Mimicking Protein Dynamics in Different Time Scales”, Journal of Chemical Physics, 123, 14, 2005. Dil Türkçe
Konukman, A.E.S., Akman, U., “Flexibility and Operability Analysis of a Hen Integrated Natural Gas Expander Plant”, Chemical Engineering Science, 60, 24, 7057-7074, 2005. Dil Türkçe
Akarsubaşı, A.T., İnce, O., Kırdar, B., Öz, N.A., Orhon, D., Curtis, T.P., Head, I.M., İnce, B.K., “Effect of Wastewater Composition on Archaeal Population Diversity”, Water Research, 39, 8, 1576-1584, 2005. Dil Türkçe